IL_5J7L_292

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

5J7L|1|DA|C|1351
5J7L|1|DA|U|1352
5J7L|1|DA|A|1353
5J7L|1|DA|A|1354
5J7L|1|DA|G|1355
*
5J7L|1|DA|C|1376
5J7L|1|DA|G|1377
5J7L|1|DA|A|1378
5J7L|1|DA|U|1379
5J7L|1|DA|G|1380

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D3

50S ribosomal protein L34

Chain DC

50S ribosomal protein L2