IL_5J7L_300

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_38862.4

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

5J7L|1|DA|U|1474
5J7L|1|DA|G|1475
5J7L|1|DA|U|1476
5J7L|1|DA|A|1477
5J7L|1|DA|G|1478
*
5J7L|1|DA|U|1513
5J7L|1|DA|G|1514
5J7L|1|DA|A|1515
5J7L|1|DA|G|1516
5J7L|1|DA|G|1517

Current chains

Chain DA

23S rRNA

Nearby chains