IL_5J7L_329

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

5J7L|1|DA|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_87290.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L

Number of instances in this motif group

1

Unit IDs

5J7L|1|DA|G|2124
5J7L|1|DA|G|2125
5J7L|1|DA|A|2126
5J7L|1|DA|G|2127
5J7L|1|DA|G|2128
*
5J7L|1|DA|C|2160
5J7L|1|DA|C|2161
5J7L|1|DA|G|2162
5J7L|1|DA|A|2163
5J7L|1|DA|C|2164
5J7L|1|DA|C|2165
5J7L|1|DA|U|2166
5J7L|1|DA|U|2167
5J7L|1|DA|G|2168
5J7L|1|DA|A|2169
5J7L|1|DA|A|2170
5J7L|1|DA|A|2171
5J7L|1|DA|U|2172
5J7L|1|DA|A|2173
5J7L|1|DA|C|2174

Current chains

Chain DA

23S rRNA

Nearby chains