IL_5J7L_356
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGUCCC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18472.4
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
5J7L|1|DB|G|23
5J7L|1|DB|G|24
5J7L|1|DB|U|25
5J7L|1|DB|C|26
5J7L|1|DB|C|27
5J7L|1|DB|C|28
*
5J7L|1|DB|G|56
5J7L|1|DB|A|57
5J7L|1|DB|A|58
5J7L|1|DB|A|59
5J7L|1|DB|C|60
Current chains
- Chain DB
- 5S rRNA
Nearby chains
- Chain DF
- 50S ribosomal protein L5
- Chain DP
- 50S ribosomal protein L18
Coloring options: