IL_5J7L_362

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGCAU*AUG(2MG)

Length

10 nucleotides

Bulged bases

5J7L|1|AA|C|1054

QA status

Modified nucleotides: 2MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48444.4

Basepair signature

cWW-L-R-cWW-cWW

Number of instances in this motif group

5

Unit IDs

5J7L|1|AA|C|1051
5J7L|1|AA|G|1052
5J7L|1|AA|G|1053
5J7L|1|AA|C|1054
5J7L|1|AA|A|1055
5J7L|1|AA|U|1056
*
5J7L|1|AA|A|1204
5J7L|1|AA|U|1205
5J7L|1|AA|G|1206
5J7L|1|AA|2MG|1207

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AC

30S ribosomal protein S3

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14