IL_5J7L_370
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 5J7L|1|CA|U|846, 5J7L|1|CA|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5J7L_370 not in the Motif Atlas
- Homologous match to IL_5J7L_399
- Geometric discrepancy: 0.2875
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
5J7L|1|CA|A|844
5J7L|1|CA|A|845
5J7L|1|CA|U|846
5J7L|1|CA|U|847
5J7L|1|CA|C|848
*
5J7L|1|CA|G|930
5J7L|1|CA|U|931
5J7L|1|CA|U|932
5J7L|1|CA|A|933
5J7L|1|CA|U|934
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain C0
- 50S ribosomal protein L30
Coloring options: