IL_5J88_119

3D structure

PDB id

5J88 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.32 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J88|1|BA|C|1303
5J88|1|BA|G|1304
5J88|1|BA|G|1305
5J88|1|BA|A|1306
5J88|1|BA|U|1307
5J88|1|BA|U|1308
5J88|1|BA|G|1309
*
5J88|1|BA|C|1328
5J88|1|BA|A|1329
5J88|1|BA|U|1330
5J88|1|BA|G|1331
5J88|1|BA|A|1332
5J88|1|BA|A|1333
5J88|1|BA|G|1334

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BM

30S ribosomal protein S13

Chain BS

30S ribosomal protein S19