IL_5J88_365
3D structure
- PDB id
- 5J88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.32 Å
Loop
- Sequence
- GAAGUUUUCA*UGAGAAUGUGCCUUCGGGAAC
- Length
- 31 nucleotides
- Bulged bases
- 5J88|1|BA|U|1030, 5J88|1|BA|C|1031
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5J88|1|BA|G|1003
5J88|1|BA|A|1004
5J88|1|BA|A|1005
5J88|1|BA|G|1006
5J88|1|BA|U|1007
5J88|1|BA|U|1008
5J88|1|BA|U|1009
5J88|1|BA|U|1010
5J88|1|BA|C|1011
5J88|1|BA|A|1012
*
5J88|1|BA|U|1017
5J88|1|BA|G|1018
5J88|1|BA|A|1019
5J88|1|BA|G|1020
5J88|1|BA|A|1021
5J88|1|BA|A|1022
5J88|1|BA|U|1023
5J88|1|BA|G|1024
5J88|1|BA|U|1025
5J88|1|BA|G|1026
5J88|1|BA|C|1027
5J88|1|BA|C|1028
5J88|1|BA|U|1029
5J88|1|BA|U|1030
5J88|1|BA|C|1031
5J88|1|BA|G|1032
5J88|1|BA|G|1033
5J88|1|BA|G|1034
5J88|1|BA|A|1035
5J88|1|BA|A|1036
5J88|1|BA|C|1037
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain AG
- 30S ribosomal protein S7
- Chain BN
- 30S ribosomal protein S14
- Chain BS
- 30S ribosomal protein S19
Coloring options: