IL_5J91_085
3D structure
- PDB id
- 5J91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Wild-type 70S E coli ribosome bound to Tigecycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.96 Å
Loop
- Sequence
- UG*UGA
- Length
- 5 nucleotides
- Bulged bases
- 5J91|1|BA|G|388
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5J91_085 not in the Motif Atlas
- Geometric match to IL_5J7L_019
- Geometric discrepancy: 0.0422
- The information below is about IL_5J7L_019
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.14
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
5J91|1|BA|U|375
5J91|1|BA|G|376
*
5J91|1|BA|U|387
5J91|1|BA|G|388
5J91|1|BA|A|389
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BP
- 30S ribosomal protein S16
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