IL_5JC9_216

3D structure

PDB id

5JC9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.03 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

5JC9|1|CA|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5JC9|1|CA|G|2123
5JC9|1|CA|G|2124
5JC9|1|CA|G|2125
5JC9|1|CA|A|2126
5JC9|1|CA|G|2127
*
5JC9|1|CA|C|2161
5JC9|1|CA|G|2162
5JC9|1|CA|A|2163
5JC9|1|CA|C|2164
5JC9|1|CA|C|2165
5JC9|1|CA|U|2166
5JC9|1|CA|U|2167
5JC9|1|CA|G|2168
5JC9|1|CA|A|2169
5JC9|1|CA|A|2170
5JC9|1|CA|A|2171
5JC9|1|CA|U|2172
5JC9|1|CA|A|2173
5JC9|1|CA|C|2174
5JC9|1|CA|C|2175

Current chains

Chain CA

23S rRNA

Nearby chains