IL_5JC9_401

3D structure

PDB id

5JC9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.03 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

5JC9|1|BA|U|1030, 5JC9|1|BA|C|1031

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5JC9|1|BA|G|1003
5JC9|1|BA|A|1004
5JC9|1|BA|A|1005
5JC9|1|BA|G|1006
*
5JC9|1|BA|U|1023
5JC9|1|BA|G|1024
5JC9|1|BA|U|1025
5JC9|1|BA|G|1026
5JC9|1|BA|C|1027
5JC9|1|BA|C|1028
5JC9|1|BA|U|1029
5JC9|1|BA|U|1030
5JC9|1|BA|C|1031
5JC9|1|BA|G|1032
5JC9|1|BA|G|1033
5JC9|1|BA|G|1034
5JC9|1|BA|A|1035
5JC9|1|BA|A|1036
5JC9|1|BA|C|1037

Current chains

Chain BA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain BN

30S ribosomal protein S14