IL_5JTE_075
3D structure
- PDB id
- 5JTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 5JTE|1|BA|A|504, 5JTE|1|BA|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5JTE_075 not in the Motif Atlas
- Geometric match to IL_5J7L_255
- Geometric discrepancy: 0.0848
- The information below is about IL_5J7L_255
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_81516.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 6
Unit IDs
5JTE|1|BA|G|481
5JTE|1|BA|A|482
5JTE|1|BA|A|483
5JTE|1|BA|C|484
*
5JTE|1|BA|G|496
5JTE|1|BA|A|497
5JTE|1|BA|G|498
5JTE|1|BA|U|499
5JTE|1|BA|G|500
5JTE|1|BA|A|501
5JTE|1|BA|A|502
5JTE|1|BA|A|503
5JTE|1|BA|A|504
5JTE|1|BA|A|505
5JTE|1|BA|G|506
5JTE|1|BA|A|507
5JTE|1|BA|A|508
5JTE|1|BA|C|509
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BS
- 50S ribosomal protein L22
- Chain BU
- 50S ribosomal protein L24
Coloring options: