IL_5JTE_153

3D structure

PDB id

5JTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

5JTE|1|BA|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5JTE_153 not in the Motif Atlas

Geometric match to IL_9H3G_006

Geometric discrepancy: 0.3176

The information below is about IL_9H3G_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

170

Unit IDs

5JTE|1|BA|U|2401
5JTE|1|BA|U|2402
5JTE|1|BA|C|2403
*
5JTE|1|BA|G|2414
5JTE|1|BA|G|2415

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L33

Chain B3

50S ribosomal protein L35

Chain BL

50S ribosomal protein L15