IL_5JU8_085
3D structure
- PDB id
- 5JU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5JU8_085 not in the Motif Atlas
- Geometric match to IL_4V9F_027
- Geometric discrepancy: 0.0974
- The information below is about IL_4V9F_027
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
5JU8|1|BA|U|703
5JU8|1|BA|G|704
5JU8|1|BA|A|705
5JU8|1|BA|A|706
5JU8|1|BA|G|707
*
5JU8|1|BA|U|724
5JU8|1|BA|G|725
5JU8|1|BA|G|726
5JU8|1|BA|A|727
5JU8|1|BA|G|728
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BC
- 50S ribosomal protein L2
Coloring options: