IL_5JU8_150

3D structure

PDB id

5JU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAG*CGACCUUGAAAUAC

Length

18 nucleotides

Bulged bases

5JU8|1|BA|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5JU8|1|BA|G|2124
5JU8|1|BA|G|2125
5JU8|1|BA|A|2126
5JU8|1|BA|G|2127
*
5JU8|1|BA|C|2161
5JU8|1|BA|G|2162
5JU8|1|BA|A|2163
5JU8|1|BA|C|2164
5JU8|1|BA|C|2165
5JU8|1|BA|U|2166
5JU8|1|BA|U|2167
5JU8|1|BA|G|2168
5JU8|1|BA|A|2169
5JU8|1|BA|A|2170
5JU8|1|BA|A|2171
5JU8|1|BA|U|2172
5JU8|1|BA|A|2173
5JU8|1|BA|C|2174

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AY

Transfer RNA; tRNA