IL_5JU8_153
3D structure
- PDB id
- 5JU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5JU8_153 not in the Motif Atlas
- Homologous match to IL_7RQB_089
- Geometric discrepancy: 0.1128
- The information below is about IL_7RQB_089
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.10
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 33
Unit IDs
5JU8|1|BA|C|2350
5JU8|1|BA|G|2351
5JU8|1|BA|A|2352
5JU8|1|BA|G|2353
*
5JU8|1|BA|C|2364
5JU8|1|BA|G|2365
5JU8|1|BA|A|2366
5JU8|1|BA|G|2367
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B3
- 50S ribosomal protein L35
- Chain BW
- 50S ribosomal protein L27
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