IL_5KCS_080

3D structure

PDB id

5KCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUUUGAAGU*AUGGAG

Length

15 nucleotides

Bulged bases

5KCS|1|1A|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KCS|1|1A|C|2129
5KCS|1|1A|U|2130
5KCS|1|1A|U|2131
5KCS|1|1A|U|2132
5KCS|1|1A|G|2133
5KCS|1|1A|A|2134
5KCS|1|1A|A|2135
5KCS|1|1A|G|2136
5KCS|1|1A|U|2137
*
5KCS|1|1A|A|2154
5KCS|1|1A|U|2155
5KCS|1|1A|G|2156
5KCS|1|1A|G|2157
5KCS|1|1A|A|2158
5KCS|1|1A|G|2159

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains