IL_5KCS_159
3D structure
- PDB id
- 5KCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AUACAAAG*CAUAAAGU
- Length
- 16 nucleotides
- Bulged bases
- 5KCS|1|1a|U|1286
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5KCS|1|1a|A|1246
5KCS|1|1a|U|1247
5KCS|1|1a|A|1248
5KCS|1|1a|C|1249
5KCS|1|1a|A|1250
5KCS|1|1a|A|1251
5KCS|1|1a|A|1252
5KCS|1|1a|G|1253
*
5KCS|1|1a|C|1284
5KCS|1|1a|A|1285
5KCS|1|1a|U|1286
5KCS|1|1a|A|1287
5KCS|1|1a|A|1288
5KCS|1|1a|A|1289
5KCS|1|1a|G|1290
5KCS|1|1a|U|1291
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1g
- 30S ribosomal protein S7
- Chain 1i
- 30S ribosomal protein S9
- Chain 1j
- 30S ribosomal protein S10
- Chain 1n
- 30S ribosomal protein S14
Coloring options: