IL_5KPV_107

3D structure

PDB id

5KPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAAA*UC

Length

6 nucleotides

Bulged bases

5KPV|1|27|A|1088

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5KPV_107 not in the Motif Atlas

Homologous match to IL_6PRV_002

Geometric discrepancy: 0.2931

The information below is about IL_6PRV_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPV|1|27|G|1087
5KPV|1|27|A|1088
5KPV|1|27|A|1089
5KPV|1|27|A|1090
*
5KPV|1|27|U|1101
5KPV|1|27|C|1102

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L36

Chain H

50S ribosomal protein L11