IL_5KPV_149

3D structure

PDB id

5KPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAUGUGUAGGAUAGG*CCCUUU

Length

21 nucleotides

Bulged bases

5KPV|1|27|G|2112

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPV|1|27|G|2107
5KPV|1|27|A|2108
5KPV|1|27|U|2109
5KPV|1|27|G|2110
5KPV|1|27|U|2111
5KPV|1|27|G|2112
5KPV|1|27|U|2113
5KPV|1|27|A|2114
5KPV|1|27|G|2115
5KPV|1|27|G|2116
5KPV|1|27|A|2117
5KPV|1|27|U|2118
5KPV|1|27|A|2119
5KPV|1|27|G|2120
5KPV|1|27|G|2121
*
5KPV|1|27|C|2177
5KPV|1|27|C|2178
5KPV|1|27|C|2179
5KPV|1|27|U|2180
5KPV|1|27|U|2181
5KPV|1|27|U|2182

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain 32

Transfer RNA; tRNA