IL_5KPV_150

3D structure

PDB id

5KPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPV|1|27|G|2124
5KPV|1|27|G|2125
5KPV|1|27|A|2126
5KPV|1|27|G|2127
5KPV|1|27|G|2128
*
5KPV|1|27|C|2160
5KPV|1|27|C|2161
5KPV|1|27|G|2162
5KPV|1|27|A|2163
5KPV|1|27|C|2164
5KPV|1|27|C|2165
5KPV|1|27|U|2166
5KPV|1|27|U|2167
5KPV|1|27|G|2168
5KPV|1|27|A|2169
5KPV|1|27|A|2170
5KPV|1|27|A|2171
5KPV|1|27|U|2172
5KPV|1|27|A|2173
5KPV|1|27|C|2174

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain 32

Transfer RNA; tRNA