IL_5KPV_181

3D structure

PDB id

5KPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

5KPV|1|26|U|1030, 5KPV|1|26|C|1031, 5KPV|1|26|G|1032

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPV|1|26|G|1003
5KPV|1|26|A|1004
5KPV|1|26|A|1005
5KPV|1|26|G|1006
*
5KPV|1|26|U|1023
5KPV|1|26|G|1024
5KPV|1|26|U|1025
5KPV|1|26|G|1026
5KPV|1|26|C|1027
5KPV|1|26|C|1028
5KPV|1|26|U|1029
5KPV|1|26|U|1030
5KPV|1|26|C|1031
5KPV|1|26|G|1032
5KPV|1|26|G|1033
5KPV|1|26|G|1034
5KPV|1|26|A|1035
5KPV|1|26|A|1036
5KPV|1|26|C|1037

Current chains

Chain 26

16S ribosomal RNA

Nearby chains

Chain 18

30S ribosomal protein S14