IL_5KPW_049
3D structure
- PDB id
- 5KPW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 5KPW|1|26|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5KPW_049 not in the Motif Atlas
- Geometric match to IL_5J7L_049
- Geometric discrepancy: 0.2413
- The information below is about IL_5J7L_049
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
5KPW|1|26|U|1060
5KPW|1|26|G|1061
*
5KPW|1|26|C|1195
5KPW|1|26|A|1196
5KPW|1|26|A|1197
Current chains
- Chain 26
- 16S ribosomal RNA
Nearby chains
- Chain 14
- 30S ribosomal protein S10
- Chain 18
- 30S ribosomal protein S14
- Chain 29
- mRNA
- Chain 30
- Transfer RNA; tRNA
- Chain 7
- 30S ribosomal protein S3
- Chain 9
- 30S ribosomal protein S5
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