IL_5KPW_149

3D structure

PDB id

5KPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGAUGUGUAGGAUAGG*CCCUUUA

Length

23 nucleotides

Bulged bases

5KPW|1|27|U|2111, 5KPW|1|27|U|2118, 5KPW|1|27|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPW|1|27|U|2106
5KPW|1|27|G|2107
5KPW|1|27|A|2108
5KPW|1|27|U|2109
5KPW|1|27|G|2110
5KPW|1|27|U|2111
5KPW|1|27|G|2112
5KPW|1|27|U|2113
5KPW|1|27|A|2114
5KPW|1|27|G|2115
5KPW|1|27|G|2116
5KPW|1|27|A|2117
5KPW|1|27|U|2118
5KPW|1|27|A|2119
5KPW|1|27|G|2120
5KPW|1|27|G|2121
*
5KPW|1|27|C|2177
5KPW|1|27|C|2178
5KPW|1|27|C|2179
5KPW|1|27|U|2180
5KPW|1|27|U|2181
5KPW|1|27|U|2182
5KPW|1|27|A|2183

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain 32

Transfer RNA; tRNA