Loop IL_5LI0

3D structure

PDB id: 5LI0 (explore in PDB, NAKB, or RNA 3D Hub)
Description: 70S ribosome from Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

Loop

Sequence: AUAGGCGAAGCGUGCGAUUGGAUUGCACGUC*GGGAGAAGACAUUGAGUCUUCGAGUCGUUGAUUU
Length: 65 nucleotides
Bulged bases: 5LI0|1|A|A|1497, 5LI0|1|A|G|1583, 5LI0|1|A|U|1602
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

5LI0|1|A|A|1481
5LI0|1|A|U|1482
5LI0|1|A|A|1483
5LI0|1|A|G|1484
5LI0|1|A|G|1485
5LI0|1|A|C|1486
5LI0|1|A|G|1487
5LI0|1|A|A|1488
5LI0|1|A|A|1489
5LI0|1|A|G|1490
5LI0|1|A|C|1491
5LI0|1|A|G|1492
5LI0|1|A|U|1493
5LI0|1|A|G|1494
5LI0|1|A|C|1495
5LI0|1|A|G|1496
5LI0|1|A|A|1497
5LI0|1|A|U|1498
5LI0|1|A|U|1499
5LI0|1|A|G|1500
5LI0|1|A|G|1501
5LI0|1|A|A|1502
5LI0|1|A|U|1503
5LI0|1|A|U|1504
5LI0|1|A|G|1505
5LI0|1|A|C|1506
5LI0|1|A|A|1507
5LI0|1|A|C|1508
5LI0|1|A|G|1509
5LI0|1|A|U|1510
5LI0|1|A|C|1511
*
5LI0|1|A|G|1570
5LI0|1|A|G|1571
5LI0|1|A|G|1572
5LI0|1|A|A|1573
5LI0|1|A|G|1574
5LI0|1|A|A|1575
5LI0|1|A|A|1576
5LI0|1|A|G|1577
5LI0|1|A|A|1578
5LI0|1|A|C|1579
5LI0|1|A|A|1580
5LI0|1|A|U|1581
5LI0|1|A|U|1582
5LI0|1|A|G|1583
5LI0|1|A|A|1584
5LI0|1|A|G|1585
5LI0|1|A|U|1586
5LI0|1|A|C|1587
5LI0|1|A|U|1588
5LI0|1|A|U|1589
5LI0|1|A|C|1590
5LI0|1|A|G|1591
5LI0|1|A|A|1592
5LI0|1|A|G|1593
5LI0|1|A|U|1594
5LI0|1|A|C|1595
5LI0|1|A|G|1596
5LI0|1|A|U|1597
5LI0|1|A|U|1598
5LI0|1|A|G|1599
5LI0|1|A|A|1600
5LI0|1|A|U|1601
5LI0|1|A|U|1602
5LI0|1|A|U|1603

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain Q: 50S ribosomal protein L17

IL_5LI0_054