IL_5LI0_057

3D structure

PDB id

5LI0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUG*CGUUAAGG

Length

11 nucleotides

Bulged bases

5LI0|1|A|U|1525, 5LI0|1|A|U|1551, 5LI0|1|A|U|1552

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LI0|1|A|C|1524
5LI0|1|A|U|1525
5LI0|1|A|G|1526
*
5LI0|1|A|C|1549
5LI0|1|A|G|1550
5LI0|1|A|U|1551
5LI0|1|A|U|1552
5LI0|1|A|A|1553
5LI0|1|A|A|1554
5LI0|1|A|G|1555
5LI0|1|A|G|1556

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L2