IL_5LI0_140

3D structure

PDB id

5LI0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAGUGC*GUAACUGAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LI0|1|a|G|662
5LI0|1|a|A|663
5LI0|1|a|G|664
5LI0|1|a|U|665
5LI0|1|a|G|666
5LI0|1|a|C|667
*
5LI0|1|a|G|754
5LI0|1|a|U|755
5LI0|1|a|A|756
5LI0|1|a|A|757
5LI0|1|a|C|758
5LI0|1|a|U|759
5LI0|1|a|G|760
5LI0|1|a|A|761
5LI0|1|a|C|762

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain h

30S ribosomal protein S8

Chain o

30S ribosomal protein S15