IL_5LL6_041

3D structure

PDB id

5LL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAAAAAAUUA*UAUAUUAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LL6|1|2|G|751
5LL6|1|2|A|752
5LL6|1|2|A|753
5LL6|1|2|A|754
5LL6|1|2|A|755
5LL6|1|2|A|756
5LL6|1|2|A|757
5LL6|1|2|U|758
5LL6|1|2|U|759
5LL6|1|2|A|760
*
5LL6|1|2|U|790
5LL6|1|2|A|791
5LL6|1|2|U|792
5LL6|1|2|A|793
5LL6|1|2|U|794
5LL6|1|2|U|795
5LL6|1|2|A|796
5LL6|1|2|G|797
5LL6|1|2|C|798

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S

40S ribosomal protein S4-A

Chain W

40S ribosomal protein S9-A

Chain X

40S ribosomal protein S11-A

Chain b

40S ribosomal protein S22-A