IL_5LMT_009

3D structure

PDB id

5LMT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.15 Å

Loop

Sequence

GCAAC*GCUAAUC*C

Length

13 nucleotides

Bulged bases

5LMT|1|A|U|173

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LMT|1|A|G|148
5LMT|1|A|C|150
5LMT|1|A|A|151
5LMT|1|A|A|152
5LMT|1|A|C|153
*
5LMT|1|A|G|168
5LMT|1|A|C|169
5LMT|1|A|U|170
5LMT|1|A|A|171
5LMT|1|A|A|172
5LMT|1|A|U|173
5LMT|1|A|C|174
*
5LMT|1|A|C|174

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain T

30S ribosomal protein S20