IL_5LQW_007

3D structure

PDB id

5LQW (explore in PDB, NAKB, or RNA 3D Hub)

Description

yeast activated spliceosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CCC*GAUG

Length

7 nucleotides

Bulged bases

5LQW|1|6|A|79, 5LQW|1|6|U|80

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LQW|1|6|C|67
5LQW|1|6|C|68
5LQW|1|6|C|69
*
5LQW|1|6|G|78
5LQW|1|6|A|79
5LQW|1|6|U|80
5LQW|1|6|G|81

Current chains

Chain 6

U6 snRNA

Nearby chains

Chain 2

U2 splicesomal small nuclear RNA; U2 snRNA

Chain 9

actin pre-mRNA

Chain A

Pre-mRNA-splicing factor 8

Chain M

Pre-mRNA-processing protein 45