IL_5LYB_482
3D structure
- PDB id
- 5LYB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- UUU*AGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LYB_482 not in the Motif Atlas
- Homologous match to IL_8P9A_275
- Geometric discrepancy: 0.0408
- The information below is about IL_8P9A_275
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LYB|1|5|U|1123
5LYB|1|5|U|1124
5LYB|1|5|U|1125
*
5LYB|1|5|A|1133
5LYB|1|5|G|1134
5LYB|1|5|A|1135
Current chains
- Chain 5
- 25S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain m0
- 60S ribosomal protein L10
- Chain n1
- 60S ribosomal protein L21-A
- Chain n9
- 60S ribosomal protein L29
Coloring options: