IL_5LZA_085

3D structure

PDB id

5LZA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUGAUGUGUAGGAUAGG*CCCUUUAA

Length

25 nucleotides

Bulged bases

5LZA|1|A|G|2112, 5LZA|1|A|U|2113, 5LZA|1|A|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZA|1|A|U|2105
5LZA|1|A|U|2106
5LZA|1|A|G|2107
5LZA|1|A|A|2108
5LZA|1|A|U|2109
5LZA|1|A|G|2110
5LZA|1|A|U|2111
5LZA|1|A|G|2112
5LZA|1|A|U|2113
5LZA|1|A|A|2114
5LZA|1|A|G|2115
5LZA|1|A|G|2116
5LZA|1|A|A|2117
5LZA|1|A|U|2118
5LZA|1|A|A|2119
5LZA|1|A|G|2120
5LZA|1|A|G|2121
*
5LZA|1|A|C|2177
5LZA|1|A|C|2178
5LZA|1|A|C|2179
5LZA|1|A|U|2180
5LZA|1|A|U|2181
5LZA|1|A|U|2182
5LZA|1|A|A|2183
5LZA|1|A|A|2184

Current chains

Chain A

23S ribosomal RNA

Nearby chains