IL_5LZA_086

3D structure

PDB id

5LZA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGGGAGG*CCGACCUUGAAAUACCAC

Length

26 nucleotides

Bulged bases

5LZA|1|A|G|2168, 5LZA|1|A|A|2169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZA|1|A|G|2121
5LZA|1|A|U|2122
5LZA|1|A|G|2123
5LZA|1|A|G|2124
5LZA|1|A|G|2125
5LZA|1|A|A|2126
5LZA|1|A|G|2127
5LZA|1|A|G|2128
*
5LZA|1|A|C|2160
5LZA|1|A|C|2161
5LZA|1|A|G|2162
5LZA|1|A|A|2163
5LZA|1|A|C|2164
5LZA|1|A|C|2165
5LZA|1|A|U|2166
5LZA|1|A|U|2167
5LZA|1|A|G|2168
5LZA|1|A|A|2169
5LZA|1|A|A|2170
5LZA|1|A|A|2171
5LZA|1|A|U|2172
5LZA|1|A|A|2173
5LZA|1|A|C|2174
5LZA|1|A|C|2175
5LZA|1|A|A|2176
5LZA|1|A|C|2177

Current chains

Chain A

23S ribosomal RNA

Nearby chains