IL_5LZA_183
3D structure
- PDB id
- 5LZA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAA*UCAC
- Length
- 40 nucleotides
- Bulged bases
- 5LZA|1|A|U|1061, 5LZA|1|A|C|1064, 5LZA|1|A|U|1065, 5LZA|1|A|U|1066, 5LZA|1|A|A|1067, 5LZA|1|A|A|1070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LZA|1|A|G|1055
5LZA|1|A|G|1056
5LZA|1|A|A|1057
5LZA|1|A|U|1058
5LZA|1|A|G|1059
5LZA|1|A|U|1060
5LZA|1|A|U|1061
5LZA|1|A|G|1062
5LZA|1|A|G|1063
5LZA|1|A|C|1064
5LZA|1|A|U|1065
5LZA|1|A|U|1066
5LZA|1|A|A|1067
5LZA|1|A|G|1068
5LZA|1|A|A|1069
5LZA|1|A|A|1070
5LZA|1|A|G|1071
5LZA|1|A|C|1072
5LZA|1|A|A|1073
5LZA|1|A|G|1074
5LZA|1|A|C|1075
5LZA|1|A|C|1076
5LZA|1|A|A|1077
5LZA|1|A|U|1078
5LZA|1|A|C|1079
5LZA|1|A|A|1080
5LZA|1|A|U|1081
5LZA|1|A|U|1082
5LZA|1|A|U|1083
5LZA|1|A|A|1084
5LZA|1|A|A|1085
5LZA|1|A|A|1086
5LZA|1|A|G|1087
5LZA|1|A|A|1088
5LZA|1|A|A|1089
5LZA|1|A|A|1090
*
5LZA|1|A|U|1101
5LZA|1|A|C|1102
5LZA|1|A|A|1103
5LZA|1|A|C|1104
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain I
- 50S ribosomal protein L11
Coloring options: