IL_5LZA_200

3D structure

PDB id

5LZA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCUUUGAAGU*AUGGAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZA|1|A|G|2128
5LZA|1|A|C|2129
5LZA|1|A|U|2130
5LZA|1|A|U|2131
5LZA|1|A|U|2132
5LZA|1|A|G|2133
5LZA|1|A|A|2134
5LZA|1|A|A|2135
5LZA|1|A|G|2136
5LZA|1|A|U|2137
*
5LZA|1|A|A|2154
5LZA|1|A|U|2155
5LZA|1|A|G|2156
5LZA|1|A|G|2157
5LZA|1|A|A|2158
5LZA|1|A|G|2159
5LZA|1|A|C|2160

Current chains

Chain A

23S ribosomal RNA

Nearby chains