3D structure

PDB id
5LZC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.8 Å

Loop

Sequence
GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAG*CAC
Length
36 nucleotides
Bulged bases
5LZC|1|A|A|1067, 5LZC|1|A|U|1078
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LZC|1|A|G|1055
5LZC|1|A|G|1056
5LZC|1|A|A|1057
5LZC|1|A|U|1058
5LZC|1|A|G|1059
5LZC|1|A|U|1060
5LZC|1|A|U|1061
5LZC|1|A|G|1062
5LZC|1|A|G|1063
5LZC|1|A|C|1064
5LZC|1|A|U|1065
5LZC|1|A|U|1066
5LZC|1|A|A|1067
5LZC|1|A|G|1068
5LZC|1|A|A|1069
5LZC|1|A|A|1070
5LZC|1|A|G|1071
5LZC|1|A|C|1072
5LZC|1|A|A|1073
5LZC|1|A|G|1074
5LZC|1|A|C|1075
5LZC|1|A|C|1076
5LZC|1|A|A|1077
5LZC|1|A|U|1078
5LZC|1|A|C|1079
5LZC|1|A|A|1080
5LZC|1|A|U|1081
5LZC|1|A|U|1082
5LZC|1|A|U|1083
5LZC|1|A|A|1084
5LZC|1|A|A|1085
5LZC|1|A|A|1086
5LZC|1|A|G|1087
*
5LZC|1|A|C|1102
5LZC|1|A|A|1103
5LZC|1|A|C|1104

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain G
50S ribosomal protein L6
Chain I
50S ribosomal protein L11
Chain M
50S ribosomal protein L16
Chain y
Selenocysteine transfer RNA

Coloring options:

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