3D structure

PDB id
5LZC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.8 Å

Loop

Sequence
GUGUAGGAUAGGU*ACCC
Length
17 nucleotides
Bulged bases
5LZC|1|A|U|2111, 5LZC|1|A|G|2112, 5LZC|1|A|U|2118, 5LZC|1|A|C|2178
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LZC|1|A|G|2110
5LZC|1|A|U|2111
5LZC|1|A|G|2112
5LZC|1|A|U|2113
5LZC|1|A|A|2114
5LZC|1|A|G|2115
5LZC|1|A|G|2116
5LZC|1|A|A|2117
5LZC|1|A|U|2118
5LZC|1|A|A|2119
5LZC|1|A|G|2120
5LZC|1|A|G|2121
5LZC|1|A|U|2122
*
5LZC|1|A|A|2176
5LZC|1|A|C|2177
5LZC|1|A|C|2178
5LZC|1|A|C|2179

Current chains

Chain A
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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