IL_5LZC_087

3D structure

PDB id

5LZC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

UGGGAGG*CCGACCUUGAAAUACCA

Length

24 nucleotides

Bulged bases

5LZC|1|A|G|2168, 5LZC|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZC|1|A|U|2122
5LZC|1|A|G|2123
5LZC|1|A|G|2124
5LZC|1|A|G|2125
5LZC|1|A|A|2126
5LZC|1|A|G|2127
5LZC|1|A|G|2128
*
5LZC|1|A|C|2160
5LZC|1|A|C|2161
5LZC|1|A|G|2162
5LZC|1|A|A|2163
5LZC|1|A|C|2164
5LZC|1|A|C|2165
5LZC|1|A|U|2166
5LZC|1|A|U|2167
5LZC|1|A|G|2168
5LZC|1|A|A|2169
5LZC|1|A|A|2170
5LZC|1|A|A|2171
5LZC|1|A|U|2172
5LZC|1|A|A|2173
5LZC|1|A|C|2174
5LZC|1|A|C|2175
5LZC|1|A|A|2176

Current chains

Chain A

23S ribosomal RNA

Nearby chains