IL_5LZC_088

3D structure

PDB id

5LZC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CUUUGAAGUG*CAUGGAG

Length

17 nucleotides

Bulged bases

5LZC|1|A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZC|1|A|C|2129
5LZC|1|A|U|2130
5LZC|1|A|U|2131
5LZC|1|A|U|2132
5LZC|1|A|G|2133
5LZC|1|A|A|2134
5LZC|1|A|A|2135
5LZC|1|A|G|2136
5LZC|1|A|U|2137
5LZC|1|A|G|2138
*
5LZC|1|A|C|2153
5LZC|1|A|A|2154
5LZC|1|A|U|2155
5LZC|1|A|G|2156
5LZC|1|A|G|2157
5LZC|1|A|A|2158
5LZC|1|A|G|2159

Current chains

Chain A

23S ribosomal RNA

Nearby chains