IL_5LZC_134
3D structure
- PDB id
- 5LZC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- UUG*CA
- Length
- 5 nucleotides
- Bulged bases
- 5LZC|1|a|U|368
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZC_134 not in the Motif Atlas
- Geometric match to IL_4V88_407
- Geometric discrepancy: 0.1867
- The information below is about IL_4V88_407
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
5LZC|1|a|U|367
5LZC|1|a|U|368
5LZC|1|a|G|369
*
5LZC|1|a|C|392
5LZC|1|a|A|393
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain p
- 30S ribosomal protein S16
- Chain y
- Selenocysteine transfer RNA
- Chain z
- Selenocysteine-specific elongation factor
Coloring options: