IL_5LZD_057

3D structure

PDB id

5LZD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGUAGG*CUGAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZD|1|A|U|1474
5LZD|1|A|G|1475
5LZD|1|A|U|1476
5LZD|1|A|A|1477
5LZD|1|A|G|1478
5LZD|1|A|G|1479
*
5LZD|1|A|C|1512
5LZD|1|A|U|1513
5LZD|1|A|G|1514
5LZD|1|A|A|1515
5LZD|1|A|G|1516
5LZD|1|A|G|1517

Current chains

Chain A

23S ribosomal RNA

Nearby chains