IL_5LZD_186

3D structure

PDB id

5LZD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUGAAUCA*UGUGAG

Length

15 nucleotides

Bulged bases

5LZD|1|A|G|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZD|1|A|C|274
5LZD|1|A|C|275
5LZD|1|A|U|276
5LZD|1|A|G|277
5LZD|1|A|A|278
5LZD|1|A|A|279
5LZD|1|A|U|280
5LZD|1|A|C|281
5LZD|1|A|A|282
*
5LZD|1|A|U|358
5LZD|1|A|G|359
5LZD|1|A|U|360
5LZD|1|A|G|361
5LZD|1|A|A|362
5LZD|1|A|G|363

Current chains

Chain A

23S ribosomal RNA

Nearby chains