IL_5LZS_174
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CAAA*UGACG
- Length
- 9 nucleotides
- Bulged bases
- 5LZS|1|9|A|516
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZS_174 not in the Motif Atlas
- Geometric match to IL_4WF9_016
- Geometric discrepancy: 0.3267
- The information below is about IL_4WF9_016
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
5LZS|1|9|C|37
5LZS|1|9|A|38
5LZS|1|9|A|39
5LZS|1|9|A|40
*
5LZS|1|9|U|514
5LZS|1|9|G|515
5LZS|1|9|A|516
5LZS|1|9|C|517
5LZS|1|9|G|518
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain EE
- 40S ribosomal protein S4
- Chain JJ
- Ribosomal protein S9 (Predicted)
- Chain YY
- eS24
- Chain jj
- Elongation factor 1-alpha 1
Coloring options: