IL_5LZT_026

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GGUC*GC

Length

6 nucleotides

Bulged bases

5LZT|1|5|G|483, 5LZT|1|5|U|484

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5LZT_026 not in the Motif Atlas

Geometric match to IL_7V9E_001

Geometric discrepancy: 0.2493

The information below is about IL_7V9E_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.2

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

5LZT|1|5|G|482
5LZT|1|5|G|483
5LZT|1|5|U|484
5LZT|1|5|C|485
*
5LZT|1|5|G|671
5LZT|1|5|C|672

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain r

eL28