IL_5LZT_034

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CUGGG*CG

Length

7 nucleotides

Bulged bases

5LZT|1|5|G|729, 5LZT|1|5|G|730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5LZT_034 not in the Motif Atlas

Geometric match to IL_8GLP_036

Geometric discrepancy: 0.0802

The information below is about IL_8GLP_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75501.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

3

Unit IDs

5LZT|1|5|C|727
5LZT|1|5|U|728
5LZT|1|5|G|729
5LZT|1|5|G|730
5LZT|1|5|G|731
*
5LZT|1|5|C|938
5LZT|1|5|G|939

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain F

uL30

Chain M

eL14

Chain S

eL20