IL_5LZT_216

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

UUG*CUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5LZT_216 not in the Motif Atlas

Homologous match to IL_4V88_424

Geometric discrepancy: 0.2661

The information below is about IL_4V88_424

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

5LZT|1|9|U|805
5LZT|1|9|U|806
5LZT|1|9|G|807
*
5LZT|1|9|C|856
5LZT|1|9|U|857
5LZT|1|9|A|858

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain EE

eS4

Chain LL

uS17

Chain WW

uS8