3D structure

PDB id
5LZT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
GCUCAGCGUG*CCGUUGAACCC
Length
21 nucleotides
Bulged bases
5LZT|1|9|U|1585, 5LZT|1|9|G|1587
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LZT|1|9|G|1541
5LZT|1|9|C|1542
5LZT|1|9|U|1543
5LZT|1|9|C|1544
5LZT|1|9|A|1545
5LZT|1|9|G|1546
5LZT|1|9|C|1547
5LZT|1|9|G|1548
5LZT|1|9|U|1549
5LZT|1|9|G|1550
*
5LZT|1|9|C|1582
5LZT|1|9|C|1583
5LZT|1|9|G|1584
5LZT|1|9|U|1585
5LZT|1|9|U|1586
5LZT|1|9|G|1587
5LZT|1|9|A|1588
5LZT|1|9|A|1589
5LZT|1|9|C|1590
5LZT|1|9|C|1591
5LZT|1|9|C|1592

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain DD
uS3
Chain FF
uS7
Chain QQ
uS9
Chain TT
eS19
Chain UU
uS10
Chain ZZ
eS25
Chain dd
uS14

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2374 s