3D structure

PDB id
5LZU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mammalian ribosomal termination complex with accommodated eRF1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.75 Å

Loop

Sequence
UCU*AAA
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_5LZU_001 not in the Motif Atlas
Homologous match to IL_5EL4_357
Geometric discrepancy: 0.1474
The information below is about IL_5EL4_357
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LZU|1|2|U|2
5LZU|1|2|C|3
5LZU|1|2|U|4
*
5LZU|1|2|A|69
5LZU|1|2|A|70
5LZU|1|2|A|71

Current chains

Chain 2
P-site tRNA

Nearby chains

Chain 5
Large subunit ribosomal RNA; LSU rRNA
Chain I
uL16
Chain ii
Eukaryotic peptide chain release factor subunit 1

Coloring options:


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