IL_5LZU_119

3D structure

PDB id

5LZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GAA*UACC

Length

7 nucleotides

Bulged bases

5LZU|1|5|A|3901, 5LZU|1|5|C|4560

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5LZU_119 not in the Motif Atlas

Homologous match to IL_8C3A_097

Geometric discrepancy: 0.1018

The information below is about IL_8C3A_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54678.7

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

5LZU|1|5|G|3900
5LZU|1|5|A|3901
5LZU|1|5|A|3902
*
5LZU|1|5|U|4558
5LZU|1|5|A|4559
5LZU|1|5|C|4560
5LZU|1|5|C|4561

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

uL3

Chain P

uL22