3D structure

PDB id
5LZU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mammalian ribosomal termination complex with accommodated eRF1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.75 Å

Loop

Sequence
AGGGCAAGUC*GCU
Length
13 nucleotides
Bulged bases
5LZU|1|9|U|607
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LZU|1|9|A|599
5LZU|1|9|G|600
5LZU|1|9|G|601
5LZU|1|9|G|602
5LZU|1|9|C|603
5LZU|1|9|A|604
5LZU|1|9|A|605
5LZU|1|9|G|606
5LZU|1|9|U|607
5LZU|1|9|C|608
*
5LZU|1|9|G|635
5LZU|1|9|C|636
5LZU|1|9|U|637

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain CC
uS5
Chain DD
uS3
Chain JJ
Ribosomal protein S9 (Predicted)
Chain ee
eS30

Coloring options:

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